The Armitage Group
Text Box: Chemistry Department

Publications

1. High-Affinity Homologous Peptide Nucleic Acid Probes for Targeting a Quadruplex-Forming Sequence from a MYC Promoter Element. Roy, Subhadeep; Tanious, Farial A.; Wilson, W. David; Ly, Danith H.; Armitage, Bruce A. Biochemistry  (2007),  46(37),  10433-10443. [Abstract]

2. Experimental and Computational Investigation of Unsymmetrical Cyanine Dyes: Understanding Torsionally Responsive Fluorogenic Dyes. Silva, Gloria L.; Ediz, Volkan; Yaron, David; Armitage, Bruce A. Journal of the American Chemical Society  (2007),  129(17),  5710-5718. [Abstract]

3. Fluorescent DNA Nanotags: Supramolecular Fluorescent Labels Based on Intercalating Dye Arrays Assembled on Nanostructured DNA Templates. Benvin, A. L.; Creeger, Y.; Fisher, G. W.; Ballou, B.; Waggoner, A. S.; Armitage, B. A. Journal of the American Chemical Society (2007); 129; 2025-2034. [Abstract]

4. A structural model for cyanine dyes templated into the minor groove of DNA. Tomlinson, Aimee; Frezza, Brian; Kofke, Matthew; Wang, Miaomiao; Armitage, Bruce A.; Yaron, David. Chemical Physics (2006), 325(1), 36-47. [Abstract]

5. DNA-templated assembly of helical multichromophore aggregates. Armitage, Bruce A.. Molecular and Supramolecular Photochemistry (2006), 14(Organic Photochemistry and Photophysics), 255-287.

6. Fluorescent PNA Probes as Hybridization Labels for Biological RNA. Robertson, Kelly L.; Yu, Liping; Armitage, Bruce A.; Lopez, A. Javier; Peteanu, Linda A. Biochemistry (2006), 45(19), 6066-6074. [Abstract]

7. Hybridization of Complementary and Homologous Peptide Nucleic Acid Oligomers to a Guanine Quadruplex-Forming RNA. Marin, Violeta L.; Armitage, Bruce A.. Biochemistry (2006), 45(6), 1745-1754. [Abstract]

8. 1H NMR and Optical Spectroscopic Investigation of the Sequence-Dependent Dimerization of a Symmetrical Cyanine Dye in the DNA Minor Groove. Hannah, Kristen C.; Gil, Roberto R.; Armitage, Bruce A.. Biochemistry (2005), 44(48), 15924-15929. [Abstract]

9. Reversible Association of PNA-Terminated Poly(2-hydroxyethyl acrylate) from ATRP. Wang, Ying; Armitage, Bruce A.; Berry, Guy C. Macromolecules (2005), 38(14), 5846-5848. [Abstract]

10. RNA Guanine Quadruplex Invasion by Complementary and Homologous PNA Probes. Marin, Violeta L.; Armitage, Bruce A.. Journal of the American Chemical Society (2005), 127(22), 8032-8033. [Abstract]

11. Role Reversal in a Supramolecular Assembly: a Chiral Cyanine Dye Controls the Helicity of a Peptide-Nucleic Acid Duplex. Renikuntla, Babu Rao; Armitage, Bruce A.. Langmuir (2005), 21(12), 5362-5366. [Abstract]

12. Cyanine dye-DNA interactions: intercalation, groove binding, and aggregation. Armitage, Bruce A.. Topics in Current Chemistry (2005), 253(DNA Binders and Related Subjects), 55-76.  [Abstract]

13. Quadruplex Formation by a Guanine-Rich PNA Oligomer. Datta, Bhaskar; Bier, Mark E.; Roy, Subhadeep; Armitage, Bruce A.. Journal of the American Chemical Society (2005), 127(12), 4199-4207. [Abstract]

14. Effect of PNA Backbone Modifications on Cyanine Dye Binding to PNA-DNA Duplexes Investigated by Optical Spectroscopy and Molecular Dynamics Simulations. Dilek, Isil; Madrid, Marcela; Singh, Rojendra; Urrea, Christian P.; Armitage, Bruce A.. Journal of the American Chemical Society (2005), 127(10), 3339-3345. [Abstract]

15. Cubic liquid-crystalline nanoparticles. Yang, Da; Armitage, Bruce; Marder, Seth R. School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, GA, USA. Angewandte Chemie, International Edition (2004), 43(34), 4402-4409.  [Abstract]

16. DNA-Templated Assembly of Helical Cyanine Dye Aggregates: A Supramolecular Chain Polymerization. Hannah, Kristen C.; Armitage, Bruce A.. Accounts of Chemical Research (2004), 37(11), 845-853. [Abstract]

17. Effect of LNA modifications on small molecule binding to nucleic acids. Marin, Violeta; Hansen, Henrik F.; Koch, Troels; Armitage, Bruce A.. Journal of Biomolecular Structure & Dynamics (2003), Volume Date 2004, 21(6), 841-850. [Abstract]

18. Recent advances in the development of peptide nucleic acid as a gene-targeted drug. Marin, Violeta L.; Roy, Subhadeep; Armitage, Bruce A.. Expert Opinion on Biological Therapy (2004), 4(3), 337-348. [Abstract]

19. Improved photostability and fluorescence properties through polyfluorination of a cyanine dye. Renikuntla, Babu Rao; Rose, Heather C.; Eldo, Joby; Waggoner, Alan S.; Armitage, Bruce A.. Organic Letters (2004), 6(6), 909-912. [Abstract]

20. A Recoverable Enzymatic Microgel Based on Biomolecular Recognition. Cao, Rong; Gu, Zhenyu; Patterson, Gary D.; Armitage, Bruce A.. Journal of the American Chemical Society (2004), 126(3), 726-727. [Abstract]

21. Self-assembled supramolecular microgels: Fractal structure and aggregation mechanism. Gu, Zhenyu; Patterson, Gary; Cao, Rong; Armitage, Bruce. Journal of Polymer Science, Part B: Polymer Physics (2003), 41(23), 3037-3046. [Abstract]

22. Synthesis and characterization of thermoreversible biopolymer microgels based on hydrogen bonded nucleobase pairing. Cao, Rong; Gu, Zhenyu; Hsu, Lorraine; Patterson, Gary D.; Armitage, Bruce A.. Journal of the American Chemical Society (2003), 125(34), 10250-10256. [Abstract]

23. Detection of single nucleotide mismatches via fluorescent polymer superquenching.  Kushon, Stuart A.; Bradford, Kirsten; Marin, Violeta; Suhrada, Chris; Armitage, Bruce A.; McBranch, Duncan; Whitten, David. Langmuir (2003), 19(16), 6456-6464. [Abstract]

24. Electrostatic Contributions to Cyanine Dye Aggregation on Peptide Nucleic Acid Templates.  Wang, Miaomiao; Dilek, Isil; Armitage, Bruce A..  Langmuir (2003), 19(16), 6449-6455. [Abstract]

25. Formation of a PNA2-DNA2 Hybrid Quadruplex.  Datta, Bhaskar; Schmitt, Christoph; Armitage, Bruce A..  Journal of the American Chemical Society (2003), 125(14), 4111-4118. [Abstract]

26. The impact of nucleic acid secondary structure on PNA hybridization.  Armitage, Bruce A.  Drug Discovery Today (2003), 8(5), 222-228. [Abstract]

27. 10 Bioinspired organic chemistry.  Armitage, Bruce A..  Annual Reports on the Progress of Chemistry, Section B: Organic Chemistry (2002), 98 503-541. [Abstract]

28. Colorimetric detection of PNA-DNA hybridization using cyanine dyes.  Wang, Miaomiao; Armitage, Bruce A..  Methods in Molecular Biology (Totowa, NJ, United States) (2002), 208(Peptide Nucleic Acids), 131-142.

29. Helical Aggregation of Cyanine Dyes on DNA Templates: Effect of Dye Structure on Formation of Homo- and Heteroaggregates.  Garoff, Rachel A.; Litzinger, Elizabeth A.; Connor, Rebecca E.; Fishman, Irene; Armitage, Bruce A..  Langmuir (2002), 18(16), 6330-6337. [Abstract]

30. Bioinspired organic chemistry.  Armitage, Bruce A..  Annual Reports on the Progress of Chemistry, Section B: Organic Chemistry (2001), 97 483-513. [Abstract]

31. The minor groove of DNA as a template for self-assembly of helical aggregates of cyanine dye molecules.  Yaron, David; Armitage, Bruce A.; Raheem, Izzat; Kushon, Stuart; Seifert, Jennifer L.  MCLC S&T, Section B: Nonlinear Optics (2000), 26(1-3), 257-264.

32. Effect of Secondary Structure on the Thermodynamics and Kinetics of PNA Hybridization to DNA Hairpins.  Kushon, Stuart A.; Jordan, Jason P.; Seifert, Jennifer L.; Nielsen, Henrik; Nielsen, Peter E.; Armitage, Bruce A..  Journal of the American Chemical Society (2001), 123(44), 10805-10813. [Abstract]

33. Hybridization of PNA to Structured DNA Targets: Quadruplex Invasion and the Overhang Effect.  Datta, Bhaskar; Armitage, Bruce A..  Journal of the American Chemical Society (2001), 123(39), 9612-9619. [Abstract]

34. Recognition of ATGA Sequences by the Unfused Aromatic Dication DB293 Forming Stacked Dimers in the DNA Minor Groove.  Bailly, Christian; Tardy, Christelle; Wang, Lei; Armitage, Bruce; Hopkins, Katherine; Kumar, Arvind; Schuster, Gary B.; Boykin, David W.; Wilson, W. David. INSERM U-524 et Laboratoire de Pharmacologie Antitumorale du Centre Oscar Lambret, IRCL, Lille, Fr. Biochemistry (2001), 40(33), 9770-9779. [Abstract]

35. Investigation of DNA binding modes for a symmetrical cyanine dye trication: effect of DNA sequence and structure.  Cao, Rong; Venezia, Carl F.; Armitage, Bruce A..  Journal of Biomolecular Structure & Dynamics (2001), 18(6), 844-856.

36. Bioinspired organic chemistry.  Armitage, Bruce A..  Annual Reports on the Progress of Chemistry, Section B: Organic Chemistry (2000), 96 187-229. [Abstract]

37. DNA-Templated Formation of a Helical Cyanine Dye J-Aggregate.  Wang, Miaomiao; Silva, Gloria L.; Armitage, Bruce A..  Journal of the American Chemical Society (2000), 122(41), 9977-9986. [Abstract]

38. Spontaneous Assembly of Helical Cyanine Dye Aggregates on DNA Nanotemplates.  Seifert, Jennifer L.; Connor, Rebecca E.; Kushon, Stuart A.; Wang, Miaomiao; Armitage, Bruce A..  Journal of the American Chemical Society (1999), 121(13), 2987-2995. [Abstract]

39. Molecular Recognition of PNA-Containing Hybrids: Spontaneous Assembly of Helical Cyanine Dye Aggregates on PNA Templates.  Smith, Jeffrey O.; Olson, Darren A.; Armitage, Bruce A..  Journal of the American Chemical Society (1999), 121(12), 2686-2695. [Abstract]